Dongwook Kim

Dear Arancha, The feature you requested is not supported in the current stable version, however I find it useful and implemented it 😄 Please use this binary: [EzAAI_v1.2.2.unstable.jar.zip](https://github.com/endixk/ezaai/files/13066040/EzAAI_v1.2.2.unstable.jar.zip) To obtain...

Please refer to the comment I wrote before: https://github.com/steineggerlab/ufcg/issues/16#issuecomment-1550556324 If the issue persists, please provide following information for further examination: - Platform (OS) - Installation method (manual, conda, etc.) -...

Hi, sorry for the late reply. If the installation of `augustus` was successful, running `/path/to/your/augustus --version` from your terminal should print the version number of AUGUSTUS. Please check if this...

Hi, this is a bit tricky but doable. First you'll have to generate a model of your custom marker(s) using the `train` module. You'll need a handful of ground-truth protein...

Could you please give me extra information by answering following questions: - Does the error occurs on [all of / some of / one of] your genomes? - From the...

Thanks to your example file, I realized that the FASTA parsing algorithm is flawed 😅 The program is supposed to extract the FASTA entries with identical names detected by `fastBlockSearch`,...

This issue should be fixed from the v1.0.3 release. Please let me know if this persists.

Hello, I found that the download package actually lacked ITS database, which is required for the extraction. I uploaded the updated package that will allow your command to run properly....

Hello @ignadb, It seems the change I made in the recent update on MMseqs2 parameters ruined its nucleotide search capacity 😞 This could be quickly fixed but it will take...

Hello @jackscanlan, sorry for the late reply. I also think this is a good time to release a new minor version including these updates. I will work on it soonish...