Dongwook Kim

Hi, it seems like a duplicate issue with #21. Please refer to the solution I wrote there: https://github.com/endixk/ezaai/issues/21#issuecomment-1989971561

Sorry for the way delayed response. Unfortunately it is impossible for me to figure out the exact reason that occurred the error without the data that caused such problem. I...

Hello again, I've checked your issue and indeed the program did not properly worked with BLASTp+. The issue was occurred since the program was trying to handle multiple binary paths...

Hi, sorry for the delayed response. Looks like the program ran without problem. Prompt about getEngineName() itself did not cause problems in other cases. Probably, writing permission of your system...

Hello! The error might be related to the MMSeqs2 `createdb` module, supposedly. Make sure your `mmseqs` binary is properly installed and registered on your `$PATH` variable. I have just updated...

Sorry for the way delayed response. I was completely distracted by some other issues for a while. The problem of not creating DB file happened in macOS environment, since macOS...

Hi @neelam19051, Currently our program does not support UNIX wildcard (`*`, `?`) inputs as an arguments. Therefore, a database file can only be made using a single FASTA file. If...

I mean, you **should not use the wildcard** in your command, and that is the probable reason why the output file is not created. From the command you've posted, `/home/bvs/neelam/genome/fna/*.fna`...

Dear @neptuneyt , The prokayotic constraint of the program only applies to the `extract` module which uses `prodigal`. Any other functionalities, including AAI calculations, should work with eukaryotic proteomes. Just...

Thank you for pointing this out. This is actually a result of my lazy implementation. Current code only implements comparison between two distinct set of proteomes, therefore, has no ability...