Qiyi Yuan
Qiyi Yuan
Can someone please help me figure this out? Seems like this issue persists. Many thanks!
> Sorry for the delay, @yqy6611. This should be fixed in the dev branch with [cb8786a](https://github.com/merenlab/anvio/commit/cb8786a75ad7d441429e3b25176e41f57d8a4172). Try again after a `git pull`. I'm in the midst of major upgrades to...
One approach is using longer k-mer. I found that the default k-mer set for metagenomics is not enough. Longer k-mer will reduce RAM consumption during tandem-repeat resolution. If more SSD...
Hi Anni, Thanks for your informative reply. Let me set an example: we can detect CTX-M genes from metagenome data sampled from marine niches. However, the risk hierarchy covered both...
Attached is my ~/.R/Makevars: CC=/opt/homebrew/opt/llvm/bin/clang CXX=/opt/homebrew/opt/llvm/bin/clang++ CFLAGS += -Xclang -fopenmp LDFLAGS += -L/opt/homebrew/opt/libomp/lib -lomp CPPFLAGS += -I/opt/homebrew/opt/libomp/include
@Mamba413 Well noted.
You can use seqkit
I think you can try genomad instead.
This is our own workstation. So any suggestions on how to fix this issue?
I have checked the system log, but there are no errors related to this.