Prasoon

icon indicating a website link https://www.img.cas.cz/en/ icon indicating an email [email protected]

icon company Institute of molecular genetics icon location Prague icon location PhD Bioinformatician pivoting to Data Science | ML & Biostatistics | Python • R • SQL | Data-Driven Problem Solver

Results 3 issues of Prasoon

Average profile around user supplied branch point region

Hi, I have used Chip-seeker for average profile around the splice site. Now, I have bed file with branch-point coordinates. I need to perform average profile for the branchpoint. I...

change of linetype for plotAvgProf

Hi, I have two condition I want separate line type along with colour. I used this, plotAvgProf(gL1, xlim=c(-100, 100), xlab="Genomic Region (5'->3')", ylab = "Xlinks Count Frequency") + ggtitle ("3ss")...

Breaker2 parameters for non cannonical splice site

8 comment

I have to annotate novel diplonema genome. This species contains non-cannonical intron (Non GT-AG). So that I chose to use braker. I have run command prothint to generate and prothint_augustus.gff...

enhancement