Christian Brandt
Christian Brandt
hi, sorry for the late reply. seems to be related to conda are you able to create a conda environment on your computer for maxbin2? (this one `bioconda::maxbin2=2.2.7`)
conda is rather bad at installing stuff. might be worth a try to install singularity or docker and use this or install singularity via conda and run singularity via the...
```` docker: Got permission denied while trying to connect to the Docker daemon socket at unix:///var/run/docker.sock: Post "http://%2Fvar%2Frun%2Fdocker.sock/v1.24/containers/create?name=nxf-sbPGQn2LYaSr42p3We0ZlbmQ": dial unix /var/run/docker.sock: connect: permission denied. ```` do you have sudo rights...
hi, conda is always a pain -.- the text you provide is difficult to read but in the end it states `mv: no se puede efectuar stat' sobre 'binning_results.eps': No...
@RVanDamme can you tune in as you setup the conda stuff?
no, it's sadly not normal. but the parser is not that important. it just summarizes some of the data can you paste the `.command.log` file here? located in the workdir...
@RVanDamme any idea regarding this?
hi, i updated the singularity profile. You can use e.g. `--cachedir dir/` to specify a location to store and use the singularity images. default location would be `./singularity_images`. The changes...
* seems like that there are no samples in the input channel. whats the content of the illumina/ and nanopore/ dirs?
Thanks for responding. I see #2701 has a similar problem. We are managing several config files across multiple profile to reduce the Code management (e.g. a container config to just...