Javier Millán Acosta
Javier Millán Acosta
Hi, any plans to fix this issue?
http://semanticscience.org/resource/CHEMINF_001101
@egonw note the label I added, upcoming discussion for the issues under this tag.
The original ontology is indeed insufficient. But a few predicates on the ENMO side would allow to still import these terms making a clear distinction between cells/cell lines (where even...
Write up a document with the mappings. Look at SSOM
> hi, this term is too specific for SIO. Hi Michiel, understood, though the following classes represent similar DISGENET statistics: - http://semanticscience.org/resource/SIO_001351 - http://semanticscience.org/resource/SIO_001352
> @jmillanacosta what did you decide to do? We added a sister class to the existing SIO classes to our own development ontology, for now.
> can you point me to your development ontology? > > m. > […](#) Sure, we have it here for now https://raw.githubusercontent.com/BioDataFuse/pyBiodatafuse/refs/heads/main/src/pyBiodatafuse/resources/biodatafuse.owl
This table results from combining - https://github.com/jmillanacosta/nano_test_guidelines_landscape/blob/main/oecd.ipynb - eNanoMapper endpoints echa_synonym | endpoints_gracious | endpoints_echa | IRI | score | Corresponding OECD Test Guideline(s) -- | -- | -- |...
This caused issues before (see #62) because it wasn't clear to users which owl to use. I have no strong argument for keeping the modules separate so I'd go with...