Kupac

Results 13 comments of Kupac

I'm using the latest devel (725197c). I am testing on a reduced set of samples, so my design matrix is probably confounded. I still get this error, even though warrenmcg-s...

I dont't seem to be able to reproduce this error, so please ignore my previous comment. I am testing two versions, so maybe I got this error with the stable...

With the devel version, I see a completely different error message, nothing to do with matrices. I think the design matrix one came up with the stable version, where it's...

OK, I managed to find the logs of my last sleuth devel run. I got the following error: 2017-12-01T12:41:05.642840877Z reading in kallisto results 2017-12-01T12:41:05.642884419Z dropping unused factor levels 2017-12-01T12:41:07.887909194Z .........

Thanks for pointing this out, really good to know! I switched to tags. Unfortunately, another dependency, quarto, doesn't use tags or releases :-/

I just realised that the lsb-release is not a dependency, so I removed it. It was a remainder of my attempt to fix the lack of `/etc/os-release` in the build...

Could someone please merge this if it's good to go? If we don't hurry up, we'll have a new version soon :)

Thanks for the suggestion. recompiled it and it's still working for me. If Ofborg and everyone else is happy, please merge, so I can update again a few weeks, probably...

> @Kupac fyi tried to split overrides up in `packagesWithNativeBuildInputs` and the `arrow-cpp` `otherOverrides = old: new:` code in `otherOverrides` section. didn't work, so i'm keeping it how it is....

We could match the version of the two arrows like this, without having to write it out by hand: https://github.com/Kupac/nixpkgs/commit/0603a7a014ccbb4c44226ecdf8fa31cd274ba322 We'd still have to update the hash when the build...