Jolleboll

Crash before/during call-gtc_tsv, difficult to interpret the error message...

1

Error message: `[2022-04-27 11:50:34,79] [info] BackgroundConfigAsyncJobExecutionActor [e38dbc61mocha.gtc_tsv:NA:1]: job id: 22366 [2022-04-27 11:50:34,79] [info] BackgroundConfigAsyncJobExecutionActor [e38dbc61mocha.gtc_tsv:NA:1]: Status change from - to Done [2022-04-27 11:50:35,16] [info] WorkflowManagerActor: Workflow e38dbc61-b064-4141-9c6a-e5d54d6dd2f3 failed (during ExecutingWorkflowState):...

What has been calculated in the pi output if there is only one individual?

3

Hello. I'm running pixy with two populations, "case", and "control". Sometimes I have only one control sample, so I'm confused about how to interpret the pi output for this single...

Triple or quadruple reads stacked in TRVZ images?

1

Hello there, when I make TRVZ images, the 8-10 reads (confirmed with IGV) that span the area are tripled or quadrupled, with mapping differences in the flanking regions. How should...

Hello, I'm running GAV on the input/output of the example bundled with the latest ExpansionHunter. It runs in 1 second without errors but no output, no output whatsoever, anywhere. Any...

Hello, apologies if this is a really dumb question. I have been tasked to perform a "GWAS analysis" on some genotype data. I usually do this in R with a...