Yashvardhan Jain issues

Results 4 issues of


                                            Yashvardhan Jain

Calculating Jacobian Determinant Image after SyN Registration

Hi, I'm working on symmetric diffeomorphic 3D image registration. I was wondering if there is a way to calculate the jacobian determinant image of the resulting registered image in DIPY?...

type:new feature

ValueError: data too large for non-BigTIFF file

Hi, I am trying to save a numpy array (RGB image of an H&E histology slide; dtype=uint8) as an ome.tif file using multiplex_img_to_ome_tiff(). The array is a little over 4...

Adding scale bar to spatial view image

Hi, I'm trying to show an image (pyramidal ome-tiff) in the spatial view. How I can show the scale bar as well? From other issues, it seems like the image...

Minimal example for obsSegmentations.json for visualizing polygons in Spatial View

Hi, I'm trying to visualize polygons (given in a JSON file similar to the example at http://vitessce.io/docs/data-file-types/#obssegmentationsjson) in the Spatial view but am unable to do so. I get a...