Rory Munro

Results 20 issues of Rory Munro

Hey! Trying to build the index, using 10 threads, on a server with 128Gb ram, but keep getting a segmentation fault after a few hours. Any ideas? Cheers , Rory

### Describe the bug Using the -m flag for audio only on any video throws this error every *five* seconds: ``` A: 00:00:39 / 00:00:49 (80%) Cache: 9.7s/379KB [ffmpeg] https:...

bug

Ultra long reads segfault stats when using the `mappy-rs` plugin to align. The problem seems to be passing the memory around after it has been sent into the rust scope....

bug
skill-issue

## Issue Currently decisions do not undergo any validation in TOMLs. `Actions` must be one of `stop_receiving`, `unblock` or `proceed`, but Decisions can be anything. For example the following Region...

bug
enhancement

# Feature being added - Filtering! Filter reads and alignments based on a flexible "mini language" specified in the TOML. Would go into config TOML under the respective place for...

enhancement
epic
needs discussion

Once Changelog becomes longer, it may become unwieldy to keep appending it to the bottom of README.md. Would make sense as a separate file in `/docs`. It could then be...

enhancement
idea

An idea but it would be nice to rename some of the counters and variables! We have a lot of intermixing between `actions` and `decisions` going on. Example: ```python #...

enhancement
idea

Use this - https://github.com/python-attrs/attrs/blob/23.1.0/src/attr/_version_info.py Allows to include a stable modifier for our benefit, whilst still creating wheels in line with [PEP440](https://peps.python.org/pep-0440/#final-releases) We would then version things as `{YYYY}.{MINOR}.{MICRO}.{Modifier}` Where modifier...

enhancement

# Highlights Adds in compatibility for MinKNOW 6. > [!WARNING] Breaking for any version of `MinKNOW

Catches the specific condition where some channel numbers are 0 due to the flongle having a weird shape. Only relevant when drawing, as we loop all channel numbers returned by...