Adam Stuckert

Results 6 issues of Adam Stuckert

Output to log

3 comment

Hi, I'm currently scaffolding an assembly with some Nanopore data, but it is somewhat difficult to figure out the status of this job. There is no output to a logfile...

Fix BUSCO target

Add filtering by TPM and recovery via blast

clarify trimming/cleaning

Move salmon quantification snippet to be in order

Incorporating BUSCO lineages causes failures in Braker runs and kills the run

19 comment

Hello, I am running the current version of Braker and repeatedly running into this issue with incorporating BUSCO genes via compleasm: ``` ERROR in file /opt/BRAKER/scripts/braker.pl at line 4554 Failed...