Adam Stuckert

Results 11 comments of Adam Stuckert

Hello, Thanks for the software, it is quite useful. I really appreciate it. I'll start this by saying I am likely an edge-case user. I'm converting an 11 GB gff3...

Thanks very much @Juke34! I'll install it and test it out today. I'll let you know how it does in the near future.

Hi, Sorry for the delay. I meant to test this out and then _gestures vaguely at the USA_. Anyway, it ran in ~24 hours this time with the same genome...

Did you figure this out @NBKingsley ? I'm getting the same error.

Excellent, that worked. Thanks Camille!

I am having this same issue. On my system I have tracked down the issue to a ProtHint error. ProtHint relies on an attribute `sched_getaffinity` within the `os` module. However,...

> Please do not use the current GeneMark-ETP from GitHub. For some reason, it is not the version that BRAKER requires. Please use Docker or Singularity because the working ETP...

Hi @AFrolicOfFerns, I literally have no recollection of running this program. Clearly I did, given this issue and the fact that I have slurm submission scripts for this program. Unfortunately,...

Tetrapoda will probably be the most informative for your purposes.

Hi @kokyriakidis, It looks like you are right and this error is occurring because it expects the same exact header before the `/1` or `/2` (see: https://github.com/bcgsc/abyss/wiki/ABySS-Users-FAQ). You can try...