Output to log
Hi,
I'm currently scaffolding an assembly with some Nanopore data, but it is somewhat difficult to figure out the status of this job. There is no output to a logfile or the screen, and no noticeable output to files in the last 6 days. 1) Is this normal? 2) Can future versions include this?
Thanks!
Hi @AdamStuckert , did your job finish successfully? About how long did it take? (if you can remember!)
Hi @AFrolicOfFerns,
I literally have no recollection of running this program. Clearly I did, given this issue and the fact that I have slurm submission scripts for this program. Unfortunately, I deleted all output (including logs) in a quota-related purge.
No worries - thanks for your fast response!
From: Adam Stuckert @.> Sent: Thursday, December 16, 2021 1:53 PM To: lpryszcz/pyScaf @.> Cc: Jennings, Emily @.>; Mention @.> Subject: Re: [lpryszcz/pyScaf] Output to log (#7)
Hi @AFrolicOfFernshttps://urldefense.com/v3/__https://github.com/AFrolicOfFerns__;!!HXCxUKc!nYH4CMb3SW3lcO4zZX4AvHjhFwkCJg0cTu57InF2L0V3MzpXdvjVy1c5WTWV0EQApg$,
I literally have no recollection of running this program. Clearly I did, given this issue and the fact that I have slurm submission scripts for this program. Unfortunately, I deleted all output (including logs) in a quota-related purge.
— Reply to this email directly, view it on GitHubhttps://urldefense.com/v3/__https://github.com/lpryszcz/pyScaf/issues/7*issuecomment-996088230__;Iw!!HXCxUKc!nYH4CMb3SW3lcO4zZX4AvHjhFwkCJg0cTu57InF2L0V3MzpXdvjVy1c5WTXXtltVdA$, or unsubscribehttps://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/AMHT47CE2PG6G5IVJYF5MCDURIYRRANCNFSM4HW5YSTA__;!!HXCxUKc!nYH4CMb3SW3lcO4zZX4AvHjhFwkCJg0cTu57InF2L0V3MzpXdvjVy1c5WTUes3NM2A$. Triage notifications on the go with GitHub Mobile for iOShttps://urldefense.com/v3/__https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675__;!!HXCxUKc!nYH4CMb3SW3lcO4zZX4AvHjhFwkCJg0cTu57InF2L0V3MzpXdvjVy1c5WTVC5iZVNA$ or Androidhttps://urldefense.com/v3/__https://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign*3Dnotification-email*26utm_medium*3Demail*26utm_source*3Dgithub__;JSUlJSU!!HXCxUKc!nYH4CMb3SW3lcO4zZX4AvHjhFwkCJg0cTu57InF2L0V3MzpXdvjVy1c5WTVyPL8xJw$. You are receiving this because you were mentioned.Message ID: @.***>