Vittorio Zanzani comments

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                                            Vittorio Zanzani

Rotating specific branches when you have thousands of them

Sure! It now here too https://stackoverflow.com/q/73047733/19585124

Option to skip postprocessing

OK, thank you! Maybe I can look into it!

Re-running the same data produces different results?

Hi everyone, do you have updates? @dgacquer so would you say that everything besides the clustering with igraph is deterministic? @AntonioDeFalco can you confirm based on the source code? By...

Unconstrained integration error - "more elements supplied than there are to replace"

Hi @LacquerHed I had the same error, in the same step. This is my code (the part that generates the error) ```r seRNA = readRDS("scRNA-Hematopoiesis-Granja-2019.rds") seurObj = CreateSeuratObject(counts = CreateAssayObject(assay(seRNA)),...

Unconstrained integration error - "more elements supplied than there are to replace"

Hi @KyriakisDimitrios We later found out that the change that fixed the problem was actually reverting Seurat (and SeuratObject) to version 4.3, which in our case came together with reverting...

Sudden Error in DoubletScoring; worked perfectly fine previously

I had a similar error in addDoubletScores, but it traced back to Seurat's FindClusters in my case. My colleagues and I prepared a training for scATACseq data analysis where we...