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Hi Shujun ! Thinks for you biosoft LTR_retriever, but now I 'am enconter some problem that what means "-0" of Insertion_Time in .pass.list files?
Hi~ TEsorter can be worked in animal genome ?
Dear author, but my result is the result of CAFE4, how should I extract the gene ID of expansion and contraction?
Hello, I don't know what went wrong, could you tell me? thank you
Dear author, I got the assembly after running the software, but the estimated genome integrity is very low, C:54.2%[S:42.5%,D:11.7%],F:2.0%,M:43.8%,n:1013,E:4.0%, I am not sure what went wrong. I attach the running...
Dear author, how can you assemble X and Y chromosomes? What parameters and data need to be added
Dear Author, Thank you for providing the AGAT software — it is a great tool for integrating genome annotations. However, I have a question out of curiosity. When I previously...
Dear Authors, I'm writing to seek your advice regarding an observation in my cross-species single-cell data analysis. I've integrated scRNA-seq data from three species for the same tissue type. Initially,...
Hi DerKevinRiehl~ Now I want to annotate the TE of the genome, but I don't know which step or pipeline to start with. Could you please send me an annotation...
Dear Author, I am interested in selecting a cross‑species integration problem. Previously, I used LIGER to integrate datasets from 11 species (with 6,300 one‑to‑one orthologous genes across all 11), and...