George Wu
George Wu
Actually no one has done such things before according to my knowledge lol. I've forked the repo https://github.com/yxwucq/cellhint to implement it. I created this forked version mainly because I wanted...
Hi there! Based on the latest update of this issue, is there already a multithreads implement of `sc.tl.rank_genes_group`? When I run this command using scanpy v1.11.0, it still use single...
I found that using `wilcoxon` methods, the most time-cosuming function is `df.rank()` at: https://github.com/scverse/scanpy/blob/1.11.0/src/scanpy/tools/_rank_genes_groups.py#L81 This `pd.DataFrame.rank()` function doesn't use parallel computation and consists of large proportion of computation time. Meanwhile...
Can I create a PR based on this @jamestwebber ? It seems that #2060 hasn't made progress since three years ago @flying-sheep