Yiming Yang

To follow up, I found this article https://aws.amazon.com/blogs/compute/creating-an-aws-batch-environment-for-mixed-cpu-and-gpu-genomics-workflows/ talking about setting up GPU computing environments. Does it still work today?

Hi @umarteauowkin , In the attachment is a test file which triggers the issue at my side. The counts is `count_df.csv`, and metadata is `metadata.csv`. The design factor is `condition`,...

And just let you know that all the 3 places show that `self.quiet` is `False`. However, I cannot find any other places where `self.quiet` is changed in `dds.py` file. However,...

@roanvanscheppingen Yes, you are right. I reran my job and notice that its memory usage peak could be 80GB. In my previous run I didn't rigorously check the memory usage.

Thank you in advance!

Hello. I just wanna follow up on this discussion. In my case, I have cell 0 with population = 858, while in `transcript-metadata.csv.gz`, 10,751 transcripts are assigned to cell 0....

Thank you @dcjones for your suggestion! I'll definitely try it.

Hi @dspeck1 , Thank you for your immediate help! I checked the `my-private-network` and `my-private-subnetwork` labels in my project (by running `gcloud projects describe` command), and neither of them has...

Thanks! I did see the trailing `/` is added by Cromwell: https://github.com/broadinstitute/cromwell/blob/develop/supportedBackends/google/batch/src/main/scala/cromwell/backend/google/batch/models/VpcAndSubnetworkProjectLabelValues.scala#L15. I tried to set by literals as the following: ``` virtual-private-cloud { network-name = "$NETWORK-NAME" subnetwork-name = "$SUBNETWORK-NAME"...

I then set `network-label-key` to a non-existing label name, hoping that cromwell could fall back to using literals at runtime: ``` virtual-private-cloud { network-name = "projects/.../global/networks/$NETWORK-NAME" subnetwork-name = "regions/.../subnetworks/$SUBNETWORK-NAME" network-label-key...