xiagjt comments

Repositories
Issues
Comments

Results 5 comments of


                                            xiagjt

How to set the -s parameter?

thank you !

Is there a version of permuteGPAT that can permute XP-EHH score ?

The XP-EHH is directional. If I want to keep the negative value, the permuteGPAT++ code will work ? OR I follow your suggestion and append the P value to the...

hifiasm(ONT) miss one chromosome in the assembly

Thanks for your kind reply! It is a haploid genome. Here is the code: /bioinfo/guanjt/Software.dir/hifiasm-0.25.0/hifiasm -o CG60.ont.asm -t 100 --ont /bioinfo/guanjt/Genome.CG64.dir/ONT.Hifiasm.dir/CG60.dir/9930-ONT/9930-ONT.pass.all.fq.gz; The output is below: -rw-rw-r-- 1 guanjt guanjt 297195647...

hifiasm(ONT) miss one chromosome in the assembly

OK. I will have a try! Thanks!

hifiasm(ONT) miss one chromosome in the assembly

Hello again! There's another issue with the ONT (R10) data assembly: two chromosomes are connected end-to-end, where the tail of one chromosome is linked to the head of another. Is...