chopper
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wdecoster
Excuse me. I'm currently using Apple M3 Pro, and I'm trying to download "chopper". I tried conda install and it resulted in "PackagesNotFoundError". Using bioconda and mamba also gave the...
Hey! Thanks for the great program. There were two things that would, in my eyes, really round out the utility of this tool. 1) Removal of PolyA/T tails. Only a...
Hi, It would be useful to add the ability to filter reads by timestamp. I believe this function would be possible only for ONT. A similar tool has already been...
The 0.9.0 tar file (and git tag) says 0.8.0 for the package version.
Hi, I am trying to run chopper on a University HPC cluster -With `mamba install -c bioconda chopper` I get Could not solve for environment specs The following package could...
Hi, I'm facing issues in installing chopper through conda...using bioconda channels give a missing package result.
Hello, I've been using Nanofilt and now chopper to quality filter my ONT reads. Is there a way I can obtain any output metrics/summary stats for a run? For example,...
That's a feature I needed, it would be nice to be able to output contaminant reads in a separate file. This PR does exactly that, but there are a few...
Can you add the lastest version of chopper to conda? I have been looking for a tool that is capable of trimming high quality segments from ONT reads. There is...
