W. Brian Simison comments

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                                            W. Brian Simison

fastqc outofmemoryError from seqtk generated files

and fastp cannot open the files at all.

Issue while running the executable.

I had the same issue. I believe it is a python version issue. I have python 3, but I believe SVTyper requires v 2.7. So I did the following: **Create...

looking forward to use/test this assembler, conda?

Yes, a conda package would be great.

Training data for classifier

after running git clone https://github.com/rdpstaff/RDPTools.git and make, the install hangs at get training data. It seems that the URL no longer exists in the git package.

core dump error on import

I am getting the same -m error on Ubuntu 20. `$ tomahawk import -i snp-thin.bcf -o snp -m 0.2 -h 0.001 tomahawk: invalid option -- 'm' [2021-08-26 13:26:31,717][ERROR] Unrecognized option:...

core dump error on import

I think I figured out that for 'import' the -m has changed to -n and -h is now -H. But I am getting the same core dump. ``` $ tomahawk...