vetmax7

The coordinates of Amino acids are calculated incorrectly after train and using *ckpt in run_pretrained_openfold.py

1

Hello! Explain me please, how can I use` *.ckpt ` files after train OpenFold for the prediction by `run_pretrained_openfold.py`? Or perhaps I need to somehow convert this to another format...

Hello everyone! I want to try train openfold model on small amount of data for understanding the process. How can I generate alignment_dir? Or where can I find ready data?...

mmcif_cache

8

Hello! To train FastFold we need mmcif_cache. How can I generate it? In train.py: ` parser.add_argument( "--template_release_dates_cache_path", type=str, default=None, help="""Output of scripts/generate_mmcif_cache.py run on template mmCIF files.""" ` But in...