Ted Verhey

icon indicating a website link https://www.linkedin.com/in/verheytb icon indicating an email [email protected]

icon company University of Calgary icon location Calgary, Alberta, Canada icon location Senior Computational Biologist working on brain tumors and sarcomas. I develop methods for unsupervised deconvolution and integration of (multi-)omics data.

Results 2 issues of Ted Verhey

Parsnp: Error creating Gingr input file

3 comment

I'm getting an error with Parsnp at the last step creating the Gingr input file: chaconas@chaconas-X10DRi:~/Programs/Parsnp-Linux64-v1.2$ ./parsnp -d /home/chaconas/Desktop/Projects/RDVParsnpTrial/References/GenomesAndContigs/ -g /home/chaconas/Desktop/Projects/RDVParsnpTrial/Queries/11-282_06052015.gbk -P 30000000 |--Parsnp v1.2--| For detailed documentation please see...

pandas FutureWarning resulting from chained assignment

1 comment

Hello, I'm getting this error when working with the `upsetplot` package. ```bash C:\Users\\miniconda3\Lib\site-packages\upsetplot\plotting.py:795: FutureWarning: A value is trying to be set on a copy of a DataFrame or Series through...