Vagner Fonseca

how can i get the sequence access number?

1

I'm generating my database using the command: `diamond makedb --in viral.1.protein.faa.gz -d all_virus --taxonmap prot.accession2taxid.gz --taxonnodes nodes.dmp --taxonnames names.dmp` --in: https://ftp.ncbi.nlm.nih.gov/refseq/release/viral/viral.1.protein.faa.gz --taxonmap: ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/accession2taxid/prot.accession2taxid.gz --taxonnodes: ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdmp.zip --taxonnames: ftp://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdmp.zip `diamond blastx -d...

The kronatools installation isn't working

2

Dear, I'm trying to install the software KronaTools but the file **nucl_est.accession2taxid.gz** isn't available in https://ftp.ncbi.nih.gov/pub/taxonomy/accession2taxid/... so the script **updateAccessions.sh** isn't working because when the script try to do download...