user-tq

>  I'm trying to reproduce the result of a comparison， which is its standard answer.我试图重现一个比较的结果，这是它的标准答案。 I use the following command line我使用以下命令行 （The only original files I get are fastq...

In order to obtain as many transcripts as possible corresponding to genes,i do ``` zcat /mnt/tool/software_tq/myscript/MANE.GRCh38.v1.0.summary.txt.gz |awk -F'\t' '{print $4,$6,$8,$10}'|grep 'MANE Select'|awk '{print $3}'|awk -F. '{print $1}' > MANE.list vcf2maf.pl...

thanks，I learned a lot again

I have the same issues，but finaly I found that I made a mistake about `bwa -R "@RG\tID:${x} \tPL:Illumina\tLB:${x}\tSM:${x}\tPG:bwa"` There is a space after the ID. in fact ,result of gatk...