Tinyi Chu

Thank you for your interest in our method. This is mostly likely due to a memory issue. We are currently working on a version with improved memory usage, which is...

Dear user, I have updated the current git repository to v1.4. This version has addressed the memory issue. You may try this and let me know if there it helps....

Hi Rogério, Thank you for your interest in our work. It is a bit difficult to tell where exactly it went wrong. My suggestions are as follows. 1) make sure...

Yes. I think it is related to memory. You may try setting the n.cores.2g argument with a smaller value. Also removal of unused variables from the workspace followed by cleaning...

This also seems to be a memory issue. We are working on improving the memory efficiency and user interface, but will take some time, probably ~2 weeks. Would you mind...

Hi Rogério, I have updated the current git repository to v1.4. This version has addressed the memory issue. You may try this and let me know if there it helps....

Thank you for your feedback. A few potential reasons are as follows. First, the fraction inferred by BayesPrism represents the fraction of reads (rather than the cell count) of each...

Hi Yonghui, Thank you for your interest in our tool. BayesPrism does not work with the log transformed data, as it uses multinomial distribution to model the raw count. You...

HI David, Thank you for your interest in our work. BayesPrism does not have dependency on bigmemory. I am not sure what the cause is. If you can send me...

Dear users, Thank you for your feedback. Sorry that this fell through the cracks. When parallelizing using snowfall, these functions (sample.Z.theta_n and newJointPost) should have been exported to the local...