timghaly
timghaly
Great, thanks for your advice!
Sorry, I forgot to include the commands that I used for downloading the taxonomy and reference library before building the kraken2 nr database were the following: kraken2-build --download-taxonomy --db nr...
Thanks @callAgene , that is exactly what has happened. Thanks for pointing that out for me!
Okay, great. Thanks for you answer. I will give it a go after you release the indexed nt database. Thanks for you help!
Thanks Jaebeom for responding so quickly. I will give it a go and let you know. I will be away on leave for a week, so probably won't get to...
Hi Jaebeom, My apologies for not getting back to you sooner. I ended up reducing the dataset to include only complete fungal and plant genomes, which reduced the set to...