Tobias Czauderna comments

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                                            Tobias Czauderna

Incorrect SBGN file format following writing the render information

Can this issue be closed?

Conflicting library version in maven dependency.

Can this issue be closed? It looks like the current version (2.7.3) of `xalan` does not depend on the `xml-apis` anymore.

Problems writing render extension, set DocumentBuilderFactory in SbgnUtil.addAnnotation namespace aware?

Fixed with commit 31244f8

Question on high level validation, ruleId=pd10112: if there are compartments defined, top-level glyphs must have a compartmentRef.

Just as a quick comment. SBGN-ED does not validate the SBGN-ML. SBGN-ED just validates SBGN itself.

maven build not working on some systems

Should be fixed with commit 8a9ca6c. The jaxb2-maven-plugin needed to be updated to be able to update some jars.

explicitly unknown stoichiometry ("?") could be stored as NaN

What is the rationale behind that idea? The stoichiometry (cardinality) is currently stored using a `label` element which is a generic element in SBGN-ML to store labels as strings. Thus,...