szimmerman92

Results 10 comments of szimmerman92

Definitely. I will try and let you know how it goes. Thank you very much!

Spades is no longer crashing anymore, but spades seems to be either stuck, or is taking an extremely long time. So far it has been running for about 13 hours....

Thank you!

Hi Milot, Thank you very much for the quick response. I added the arguments you suggested but it still crashed. Here is the command I ran `foldseek easy-search -k 7...

Hi Martin, Sorry for the late response. I am going to try the commit you made above. How do you install foldseek from source or using that commit? Sorry for...

Thank you very much for the instructions. Foldseek no longer dies when running but it seems like no progress is being made. It hangs during the step "Starting prefiltering scores...

I would like to know this as well. Thank you.

I am getting a very similar error when I compile from source during the `make` command > /usr/bin/ld: cannot find -lblock-aligner-c > collect2: error: ld returned 1 exit status >...

Hmm. I never got that error but this issue seems to be that you don't have the R package "quadprog". So I might try to fix this by running the...

Thanks so much for letting me know! I will give there branch a try as well.