strawberry098
strawberry098
Is there a resolution?
@g-pinel Can you provide the link to where the Seurat v4.4 package can be downloaded? I tried downloading via the below code, but have tons of issues regarding dependencies. `remotes::install_version("SeuratObject",...
Thanks for the prompt reply. However, I'm still getting dependencies errors: `ERROR: dependencies ‘igraph’, ‘leiden’, ‘miniUI’, ‘reticulate’, ‘sctransform’, ‘shiny’, ‘spatstat.explore’, ‘spatstat.geom’, ‘uwot’ are not available for package ‘Seurat’` UPDATE: I...
@sqjin Yes, I ready ran `cellchat
@sqjin `cellchat@net$prob`: all values equal zero and `cellchat@net$pval`: all values equal to one
I'm using python 3.8.15 in Jupyter notebook, and upon executing `!pip3 install .` , I get the following error: Complete output from command python setup.py egg_info: Download error on https://pypi.org/simple/setuptools_scm/:...
Hi @SeppeDeWinter I realized the install was calling an older version of python (e.g. 3.6), resulting in the above error. When I tried the same code, adding the path of...
Hi @SeppeDeWinter I'm using the regular installation method (without conda) since I'm not familiar with using conda. Thanks.
Hi @SeppeDeWinter I'm installing the package onto a server. I decided to give conda a try and installed miniconda3. The beginning of the command line now says `base`. However, despite...
Hi @SeppeDeWinter I was able to activate the conda environment. At the last step `pip install -e `. I'm getting a similar error as before of `python setup.py egg_info did...