Jay Stanley

So as it stands (2) is essentially already in place, we just don't have a `G.embedding` attribute. It's not a _problem_, but I do think that shuffling around the coordinates...

ah, ok - I was just going based on the matlab/gspbox implementation of prox_tik which uses prox when a forward operator is supplied. Of course, when the forward operator is...

Hi Rohit, I am a co-author on MELD. I want to chime in on your question about quantifying the batch effect. I agree that by visual inspection alone it is...

@scottgigante I would like to merge this into master, as the log_debug deprecation warning is blowing up our tests. Any tips on getting the CI pipeline to work?

@dburkhardt Here is a plot of the errors  And you can see the notebook that created it here https://gist.github.com/stanleyjs/cb223cedb913942c4f9349b53f800ced Clearly it's an issue. However, I was thinking of maybe...

See https://github.com/scikit-learn/scikit-learn/pull/21705

@scottgigante @dburkhardt it appears that sklearn will probably fix this gap, but not without some internal discussion over the details of the API. I am wondering if we should go...

Appears to be related to #3722. In that thread, the fix was that the user was not getting error messages. I am getting error messages, just not for this molecule....