Sofia Stamouli

Results 52 comments of Sofia Stamouli

From slack: `From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools` https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000949

I think we can add the `kaiju-mergeOutputs` to taxprofiler as optional but I do not really like the idea to give it as input to taxpasta as it involves two...

Shall this be added as an issue to [taxpasta](https://github.com/taxprofiler/taxpasta) as well?

We have the same scope, interested in classifiers on whole genomes.

@nvnieuwk Updated the `meta.yaml`

Working on this now :D

@jfy133 Added the stub for mapDirectly as well.

@nf-core-bot fix linting

@nf-core-bot fix linting

@nf-core bot fix linting