rthapa1
rthapa1
Thank you for the reply. I wonder if it is possible to plot Copy number data of non-human species with CopyNumberPlots. I tried with CopyNumberPlots package for the plant species...
Hi Bernat, Thank you for the explanation. In my genome.txt file, I have many copy numbers in multiple location of the same chromosome but it looks like duplicate chromosome numbers...
Hi Bernat, I got the way to customize the genome. I am wondering if there is a way to customize the color of copy number in genome e.g. 2.5 as...
If I use only two query samples at a time, it works and I got gfa output. But the bed file with structural variants looks weird.
Thank you, how could we know if there is deletion and translocation? Is the position in bed file corresponding to position in genome assembly? When I run multiple fast files,...
Thank you. I have sent you the files at [email protected].
It is minigraph 0.14-r415. There is no error but the output gfa file is empty.
Hi, were you able to fix this?