Rosalía

Hi! I can't connect to GISAID either. I got this error: ``` > authenticateUser() Please open this url in a browser and authenticate with your GISAID credentials. https://gpsapi.epicov.org/epi3/gps_authenticate/UBCJRPCABACMYFWKGBGSLMLMCHSCGHHVKPNJHBTKIFPQFRKZQMGYZBADCCAOVTCGBWCOTCMCDGCQVODJWZVKGDWCTEZVTPLOQTHCDDHHRGHCMIRBQALSLWDBQWMJQUDV Waiting for...

I've continued messing around with the package and I was able to use all the functions despite the error in the previous message

Versions of Conda, Docker and Singularity updated to: - modules/local/dfast (bioconda::dfast=1.3.6) - modules/local/custom/multiqc (bioconda::multiqc=1.28) - modules/local/kmerfinder/summary/ (bioconda::multiqc=1.28) When running test_full, I get the following error in kmerfinderdb download step (although...

Also when using the local version of the Zenodo database, the pipeline returns the following error: ``` ERROR ~ Error executing process > 'NFCORE_BACASS:BACASS:KMERFINDER_SUMMARY_DOWNLOAD:KMERFINDER_KMERFINDER (SRR10093028)' Caused by: Process `NFCORE_BACASS:BACASS:KMERFINDER_SUMMARY_DOWNLOAD:KMERFINDER_KMERFINDER (SRR10093028)`...

The Zenodo download issue does no longer apply. Might be due to temporary network problem

Hi! Any updates about this issue?

Thanks for your quick answer! I'll look further into `mmseqs taxonomy`