reactome2py
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reactome
python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
Hi, I'm using the microbiologist-clinician.ipynb tutorial. The tool is very useful. I have a problem while executing the last cell in the notebook when calling: content.pathways_low_diagram(...). Invoking the cell =>...
When I input expression data to `analysis.identifiers_form()` function, "Status code returned a value of 415" raises. The following code shows the difference from using the `analysis.identifiers_url()` function using the expample...
In [/exporter/diagram/{identifier}.{ext}](https://reactome.org/ContentService/#/exporter/diagramImage_1), the Default value of resource is `TOTAL`, but in [resultome2py.content.export_diagram](https://reactome.github.io/reactome2py/content.html#reactome2py.content.export_diagram), `Total`. This prevents markers from being colored in the following code. ```py from reactome2py import content, analysis markers...
Hi, I have managed to extract pathways associated with a list of genes, inspired by the example in your demo notebooks. Is there a way to find the drugs associated...
Hello- Thanks so much for maintaining this awesome library (I'm a big fan)! 😄 I was wondering if you would be open to considering adding a parameter to some of...
Is there a planned function to allow exporting Voronoi visualisation images as well? :)
