Pepijn Kooij
Pepijn Kooij
While running the PASTA GUI I receive the following error when I add the "Extra RAxML Search" ```PASTA INFO: Performing post-processing tree search in RAxML… Process Process-2: Traceback (most recent...
I receive the following error message when when I try to run TEdenovo on my assembly ``` Fatal error: Exit code 1 () cat: /home/jeremy/galaxy/tools/Pipeline/REPET/WORK/genome_Blaster_Grouper_Map/genome_Blaster_Grouper_Map_consensus.fa: Aucun fichier ou dossier de...
I was wondering if it would be possible now or in the future version to run this pipeline using long-read sequence data such as Nanopore or PacBio
I am trying to translate ONT Minion reads from fastq to fasta but get the following error `fastq_to_fasta: Error: invalid quality score data on line 19124 (quality_tok = "+"` Any...
**Are you using the latest release?** funannotate v1.8.17 **Describe the bug** I'm trying to run the test after installation using `funannotate test -t all --cpus 10` but it crashes in...
I'm having problems installing salmon from source. When running `make` I get the following error ```Consolidate compiler generated dependencies of target tbb [ 73%] Built target tbb Consolidate compiler generated...
Hi there! Enjoying the pipeline a lot, getting good data out of it! So thanks for the constant development! I know visualisation is not what funannotate is made for, however,...
@marcelauliano, this tool is great! And has been working very well (in most of my cases, some complicated samples aside). I think it would improve results for ONT nanopore reads...
Hi there Trying to use your software with a fungal genome assembly create with hifiasm, however, during the annotation part it seems to crash with the following warning ```` Traceback...
Is there any plans to implementing the newest MITOS version (v2.1.9 on bioconda) in the conda install? As far as I can tell it is compatible with python3. I've been...