Pepijn Kooij

The comment shows the following ``` [14:02:52] ~ $ /Applications/science/PASTA/PASTA.app/Contents/Resources/bin/raxmlp -bash: /Applications/science/PASTA/PASTA.app/Contents/Resources/bin/raxmlp: Bad CPU type in executable ``` here the CPU info ``` [14:01:08] ~ $ sysctl -a | grep...

ah yes, Catalina doesn't run 32-bit compiles. Glad you were able to figure that rather quickly.

I had previously downloaded the GUI version for Mac from https://sites.google.com/eng.ucsd.edu/datasets/alignment/pastaupp I now compiled the latest sate-tools-mac and pasta, and tried to run the run_pasta_gui.py, but receive the following error:...

Ok I solved that problem, but now the analyses won't start when I click the button. And I receive the following error in the terminal: ``` Traceback (most recent call...

Hi Jeremy, Currently, I can't reach the computer I'm running that analysis on, however, I had tried it three times and each time I received the error within a couple...

Not sure why you closed this. I'm in quarantine and cannot test or check things at the moment...

I am now running the same dataset on my laptop at home and run into the same error. qstat doesn't show anything. The headers are as follows: LcCcos_genome1 My assembly...

Hi Jeremy Thanks for your feedback. To be honest, I was hoping to see interesting strange things in this particular one, because it is a mutualistic symbiont, however, I just...

Thanks Jeremy, I think this can be an interesting story unfolding... On your advice I had a look at the results of some of the other software packages: Repeatmasker: 2731...

Not sure why, but I am getting a connection time out warning in FileZilla