Hayley
Hayley
Dear RoseTTAFold Team, Hi, I'm a user! I tried to predict a large protein (>2500 amino acids) using RoseTTAFold in Linux server. But, I got this message. [log/make_msa.stderr] ``` ...skipping......
Dear MAVIS team. Hi I'm Oh. I have two questions. Q1. If I change reference or annotated files, can I visualize viral integrations? Q2. I found the following fusion. (the...
Dear @tobiasrausch, Hi. I'm Oh. I executed the delly for Germline CNV calling. I want to ask about the genotype of my called CNVs (c1.cnv.bcf), or merge the calls (merged.bcf)....
Dear SpaceXR team. Hi, I really appreciate this wonderful tool. Then, I have a question. If I get the devoluted results using RCTD, can I use it to cluster spots...
Dear velocyto team I’m a user of velocyto. I have a question. I have a visium sequenced data and I attached the detailed information.  https://www.10xgenomics.com/support/spatial-gene-expression-ffpe/documentation/workflows/cytassist-ffpe/steps/experimental-design-and-planning In this setting, can...
Dear BayesSpace Team, Thank you this beautiful tool. I'm going to use the results of spatial enhance data. Then, each spot will be divided into 6 subspots. In this case,...
Dear STUtility team. When I plot the feature plots using Seurat, and STUtility package. I got two following images that is flipped. can I flip my STUtility derived feature plot...
Dear @sqjin Hi, I'm a big fan of your program. However, I have just two questions. # Q1. Spot diameter The spot diameter of 10X visium is 55um. This is...
Dear @sqjin Thank you for providing this valuable resource. I have two questions, Q1. I want to understand the impact of stroma spots on neighboring cells. In such cases, is...
Hello, I’ve been studying causal inference recently, but I’m still unsure how to properly approach my analysis — so I would really appreciate your guidance. I’m working with the following...