ntromas
ntromas
Hi, Wonder if anyone found a solution for this? Nico
Thanks! Will try that. I was thinking to create a new table with all duplicates, the total counts numbers for each of them and from which table they were extracted....
Hi Ben, We found a way to remove duplicates but I just found a potential batch effect and I was planning to add an extra step to remove contaminant using...
Hi Ben, Thanks for this information! I wonder what would happen if - let-s say I have 3 negative controls - but one of them seems to have been cross-contaminated...
Hi, The run is still in progress but I wonder how to avoid that VirSorter2 fails, maybe reducing the input size as you suggested? What is the max size the...
Hey, 80Mb is working well. I will try bigger size. Would be great to be able to combine results from split fasta and to get the % of progress during...
Hi Daniel, I also tried to use the cyanobacteria universe and got this error: The host system is detected to have 134 GB of RAM. It is recommended to use...
Hi everyone, any news for the library ? Would be great to be able to use Bracken too. Cheers!
Hi Ben, Sorry for the confusion. I mean breadth. I guess the output option "covered_bases" might help. I initially thought that breadth was the parameter --min-covered-fraction. Nico Le sam. 13...
Ok, I'll try that, thanks!