naity2
naity2
> Hi @naity2, > > thanks for raising this issue. I felt the "populations of interest" would usually be clusters, and, therefore somewhat similar to "similarity in terms of gene...
I think volcano plots can actually be useful in addition to visualizing "DE" clonotypes on UMAP plots. It would be helpful to label highly differentially expressed clonotypes on volcano plots...
Same issue, but it looks like the package is not maintained anymore.
Thank you @auesro! For now, I use the line `adata.uns['log1p']["base"] = None` every time after reading a h5ad file.
Thank you @fanxinping. Does information below help? ``` [2022-04-29T20:27:48.359275] [42b46c09263b] [8_1] [pyflowTaskWrapper:indexNormalBam] Task: 'indexNormalBam' exit code: '0' [2022-04-29T20:27:48.361815] [42b46c09263b] [8_1] [pyflowTaskWrapper:indexNormalBam] Task: 'indexNormalBam' complete. elapsedSec: 39 elapsedCoreSec: 39 [2022-04-29T20:28:38.423703] [42b46c09263b]...