mgavery
mgavery
You're gonna love this! Good old fashioned lab notebook copy :). This is the modified protocol using Qiagen's DNeasy blood and tissue kit. Important info about the sample - the...
It's almost ready to move to my plate! Giles has done the mapping and pulled coverage for single copy genes, mito and ribo using bedtools. He is going to make...
@sr320 I have an acct on gannet. I can put them there. Does that work?
@sr320 bams are here: /var/services/homes/charlie/Cgigas_WGS_bams
First pass at looking at coverage per sample for ~5000 single copy genes (top left) and then average copy number of mito and ribo genes
This is a plot to see individual variation. Color indicates family and number on each bar indicates ploidy. 
[Dip_v_trip_mito_ribo_copynum.csv](https://github.com/RobertsLab/resources/files/12363172/Dip_v_trip_mito_ribo_copynum.csv) This is the file the plots were generated from. I haven't done any stats yet
@AHuffmyer , I am planning on going to Manchester later this week (my preference is Thursday) -- would you be available to meet and look at what equipment we might...
Sounds great! Heaters with timers?