Seung Kim comments

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                                            Seung Kim

music_prop.cluster:Error in if (sum(abs(p.weight.new - p.weight)) < eps) { : missing value where TRUE/FALSE needed

I had same issue. Please let us know.

Conversion 'py2rpy' not defined for objects of type '<class 'numpy.ndarray'>'

Hi, I solved the issue `NotImplementedError: Conversion 'py2rpy' not defined for objects of type ''` by downgrade packages: rpy2==3.4.2 anndata2ri==1.0.6 Give it a try.

KeyError: 'base' when running `tl.rank_genes_groups`

Although `adata.uns['log1p']["base"] = None` seems work for `tl.rank_genes_groups` the results is weird in my analysis. When I check, logfoldchange, values didn't make any sense. Some of them are almost near...

shared_sample interpretation

Hello, If I understood correctly, lower loss value meaning two clusters are matching between experiments. (e.g. Cluster 0 in exp1 matches Cluster 3 in exp2) But I wonder from @Sayyam-Shah...

Error pulling new singularity image

Hi Michael, Maybe you can try below and pull again: `apptainer remote add --no-login SylabsCloud cloud.sycloud.io `