Kemin Zhou
Kemin Zhou
the configure script is not generated in this version. The users should not have to generate this file by themselves.
I have computers with memory 500G, could it use more memory to speed it up? I was using pipe bwa | samtools sort -t 6. I saw bwa finished, but...
I saw that the sort algorithm has -m 10G option, I will explore using this one to speed up sorting
Maybe not stale. I having the same problem and have not figured out a solution.
-- exitStatusReadTimeoutMillis: 270000; delta: 422931 Current queue status: > job: 871400: ERROR > job: 871398: ERROR > job: 871399: ERROR > job: 871397: ERROR > job: 871396: ERROR > job:...
N E X T F L O W version 20.10.0 build 5430 created 01-11-2020 15:14 UTC (07:14 PDT) cite doi:10.1038/nbt.3820 http://nextflow.io This is my nextflow version
And my pipeline did reach a final death, after so many errors. Usually my work directory contains only two files: . .. .command.run .command.sh The the symlink for input file...
look the error status is coming from slurm. If anyone found a solution please let me know.
This issue may be difficult for the software team to reproduce on their computer. So the solution may have to be from the users. Got it. Sorry. I will add...
For my data, if --R1-->