Kasper Marstal

ENH: Add Active Registration Model metrics

1

This PR adds an intensity penalty metric and a shape penalty metric inspired by Active Appearance Models. The metrics are disabled by default. Kasper Marstal and Stefan Klein "Active registration...

Add 62366-1 Templates

2

Hi, do you have plans to add templates for 62366-1? If not, would you accept contributions towards such templates? I have not investigated in detail if 62366-1 is suited for...

Fix composable blueprints

8

The Composable blueprints in ContinuousRegistration/Submissions/ComposableBlueprints are not working. This is due to two issues: - SuperElastix cannot find the included path. We should add logic to SuperElastix that resolves the...

Add git tag and commit to SuperElastix build as header file

5

See https://stackoverflow.com/questions/38823537/execute-git-describe-in-custom-target

Fix naming issues

2

The order of template arguments are reversed for some classes (e.g. itkMeshInterface). For example, the arguments reads `template` where ITK usually do `template`. Also see #109.

Fix SuperElastix Travis build

2

NiftyReg cannot clone. Set Try TLS_VERIFY to OFF. Otherwise we may have to maintain our own mirror.

Prototype Continuous Challenge Infrastructure

1

Proposed layout - Datasets/{datasetName}/{fileName}.{ext}, CMake is responsible for downloading this data - ContinuousChallenge/driver.py.in, responsible for downloading private data and running eval - Blueprints/*.json - Blueprints/README.md with a table like the...