Jack Wimberley
Jack Wimberley
It's been pointed out to me immediately that this is expected behavior as the length of the reference means that it overlaps the right flanking region in the third BED...
Thank you both for your helpful suggestions -- using bcftools in place of tabix is an option for me, and I've confirmed that specifying the BED format regions file together...
Yes, is 36.0.0 the first version to include this fix?
I'm not able to run the query with 36.0.0. Perhaps there was some breaking change in 35.0.0 or 36.0.0 (can't find one that looks relevant in the release notes) that...
If it is helpful I can try to produce a self-contained repro
Perhaps the issue was with the syntax for the partitioned parquet file location(s). I did not change the wildcard based syntax I had been using before, shown at the top...
OK, with DataFusion 36.0.0, I still get a panic when running this query in its original context -- which is a rust module using the datafusion crate and its dependencies....
Oops, apologies for the misleading noise in my previous comment -- I can't exactly reproduce what I did wrong but I must have run some subtly different query when using...
Apologies for the delay -- this issue no longer reproduces using the datafusion version 43! I did not attempt to find where between [37,43] the resolution happened but could if...
Went back -- 43.1.0 is the earlier version where the issue is fixed.