James Wasmuth
James Wasmuth
Hi @ilanshom, When I add the .ini at the end of `hinge clip-nanopore`, I get the following error `hinge clip-nanopore ecoli.edges.hinges ecoli.hinge.list demo giardia.ini` > Traceback (most recent call last):...
Hi @ilanshom, That worked too. Thanks! I let you or the creator close this issue when appropriate. For what it's worth, I found the information about large genomes very useful...
Thank you! This worked for me and saved me hours of pain. If our paths ever cross, I owe you a beer.
Thanks. The -T worked well in this instance. I'd also like to use spaln on a species (Giardia) for which there seems to be no parameter set, not one of...
I installed the latest version (2.3.2) using conda and the _table_ directory doesn't contain _IldModel.txt_. I cannot _find_ the file in the 2.3.2 installation, nor an earlier installation. Any help...
@kingcohn1 You could _copy_ or _wget_ this file https://raw.githubusercontent.com/ogotoh/spaln/master/table/IldModel.txt into the _table_ directory. Works for me.
@pvanheus _-Q7_ Perhaps, I'm doing something wrong.