jdwinkler

Discrepancy for between minimap2 and mm2-fast for assembly alignment

3

Hi, Thanks for your work on this optimized version of minimap2, I think it is quite useful. I was recently building out a pipeline involving the pairwise alignment of possibly...

BinDash 2.0 usage and build?

2

Thanks for your work on BinDash! I am interested in using BinDash2.0 as a replacement for Mash. Is there a particular commit I should build to try it? If it...

EzAAI extract a list / folder of genomes?

2

Hi, Thanks for your hard work on this tool. Is there a way that I can supply a list of genomes to calculate (one genome per line) to help perform...

Correlation with ANIm for genome analysis

1

Hi, Thanks for your hard work on sourmash. I have a question that is likely answered elsewhere, but I am using protein sketches to roughly cluster arbitrary collections of genomes...