Jayendra Shinde

Hi @rahulk87 Assigning the probability of mutational signature to every somatic mutation depends on the number of mutations attributed to that mutational signature. This would vary in your two runs...

Hi André, Could you kindly be able to send me a reproducible example of the data you are using which generates this error? It will help me look at the...

Dear André, Thank you for providing these specific example data, makes life very easy while debugging. As you mentioned, your downsampled data had low amount of data. This led to...

Hi Eva, Thanks for reaching out. To help with the analysis using the toy dataset has been provided in the example script along with the package https://github.com/FunGeST/Palimpsest/blob/master/RUNNING_PALIMPSEST_EXAMPLE/Palimpsest_test_script.R The script provides...

Hi, Thanks for reaching out. If the function works for the "other data", it seems that this data is compliant with the format required. I would highly suggest following the...

Hi beginner984, Kindly make sure you convert the data.frame columns from factors/int to default formats that are provided in our example dataset: > str(SV_data) 'data.frame': 3904 obs. of 10 variables:...

@beginner984 - These are not issues related to Palimpsest. Please check how you are transferring the workspace and objects related to your analysis back and forth between different systems. 1....