Jasmin Frangenberg
Jasmin Frangenberg
- And mention GTDB is huge. SILVA is an appropriate smaller alternative (better than default "Kalamari") for 16S-based classification, but might be not that stable in download. - SILVA ist...
Yes, good question: I tried to do so, but the syntax from modules does not work on pipeline level for some reason. If you like it more compact, I will...
> If not all in one snapshot, you could at least group by tool? Also, they are grouped by tool at the moment. :monocle_face:
Superseded by #381 :upside_down_face:
Hey @rezaiiimohammad if you want to accept multiple changes, you can add those suggestions "to batch". This is possible from the "Files changed" tab above, where you can then submit...
I am having a very similar error: **Current behaviour** After submitting a `mmseqs taxonomy` run, this sub command is being executed (and dies): ``` aggregatetaxweights mmseqs_database/database tmp1/14824571404584235274/orfs_h_swapped tmp1/14824571404584235274/orfs_tax tmp1/14824571404584235274/orfs_tax_aln SWH_IN_taxonomy/SWH_IN...
Will be worked on in #688
I've encountered segfault errors with mmseqs due to not enough memory (which is a valid reason for segfaults, according to quick web search). Large databases like NT/GTDB might need around...
That sounds great, thanks @warrenlr for considering this request for a next AMPlify release 🚀
That's really cool, thank you a quick response and release! I just have to point out one tiny thing that you missed: The version number in `AMPlify --help` still shows...