jamesnemesh

Trouble building: bam_ordered_reader.cpp.o

6

My cmake result (paths obscured): cmake -DHTS_INCLUDE_DIRS=/path/to/htslib -DHTS_LIBRARIES=/path/to/htslib/libhts.a .. -- The C compiler identification is GNU 5.2.0 -- The CXX compiler identification is GNU 5.2.0 -- Check for working C...

Hi! I'm interesting in reproducing your ELBO plot to determine the number of donors I have in a pool when demultiplexing without known donor genotypes, but instead thousand genomes reference....

File parsing issues - can't load non-numeric data.

1

Hi, this is a really interesting tool. Unfortunately, I'm running into some issues using it for "real" data. I've tried to upload a few files (that are generated from R...

emptyDropsCellRanger index out of bounds style error

2

Hi! I'm getting a crash when running emptyDropsCellRanger. The call: ``` DropletUtils::emptyDropsCellRanger(dge) ``` Where dge is a matrix of cells by genes. I'll note this data set is compatible with...