jamesnemesh

I'm interested in disabling doublet analysis for a different reason: errors in pool construction. Let's say your lab has 200 available samples to pool, and you select a set of...

I can't speak to @drneavin's code, but the two donor assignment programs will emit a cell barcode in the output for every cell in the input, as long as there's...

@drneavin This might be the best place to put this: We've released both a much more full set of [documentation](https://github.com/broadinstitute/Drop-seq/blob/master/doc/Donor_Assignment_Computational_Cookbook.pdf) and an [R library](https://github.com/broadinstitute/Drop-seq?tab=readme-ov-file#building-drop-seq-r-libraries) that generates a number of useful...